Binding of Substrates to the Central Pore of the Vps4 ATPase Is Autoinhibited by the Microtubule Interacting and Trafficking (MIT) Domain and Activated by MIT Interacting Motifs (MIMs)

The endosomal sorting complexes required for transport (ESCRT) pathway drives reverse topology membrane fission events within multiple cellular pathways, including cytokinesis, multivesicular body biogenesis, repair of the plasma membrane, nuclear membrane vesicle formation, and HIV budding. The AAA ATPase Vps4 is recruited to membrane necks shortly before fission, where it catalyzes disassembly of the ESCRT-III lattice. The N-terminal Vps4 microtubule-interacting and trafficking (MIT) domains initially bind the C-terminal MIT-interacting motifs (MIMs) of ESCRT-III subunits, but it is unclear how the enzyme then remodels these substrates in response to ATP hydrolysis. Here, we report quantitative binding studies that demonstrate that residues from helix 5 of the Vps2p subunit of ESCRT-III bind to the central pore of an asymmetric Vps4p hexamer in a manner that is dependent upon the presence of flexible nucleotide analogs that can mimic multiple states in the ATP hydrolysis cycle. We also find that substrate engagement is autoinhibited by the Vps4p MIT domain and that this inhibition is relieved by binding of either Type 1 or Type 2 MIM elements, which bind the Vps4p MIT domain through different interfaces. These observations support the model that Vps4 substrates are initially recruited by an MIM-MIT interaction that activates the Vps4 central pore to engage substrates and generate force, thereby triggering ESCRT-III disassembly.     

六种广西道地药材的体外纤溶活性研究

目的：研究六种广西道地药材的体外纤溶活性。方法：采用纤维蛋白平板法,对罗汉果、葛根、天花粉、金银花、姜黄和广金钱草的不同提取液进行体外纤溶活性研究;用大孔吸附树脂柱对广金钱草热水提取物进行分离,并对不同洗脱部位进行体外纤溶活性筛选;用化学定性方法对广金钱草的纤溶活性部位进行化学成分检测。结果：葛根和金银花的冷水超声提取液,天花粉的热水提取液和冷水超声提取液,广金钱草的热水提取液、冷水超声提取液和20％乙醇超声提取液均有体外纤溶作用;广金钱草大孔树脂柱层析的水洗脱部位具有稳定的体外纤溶活性;广金钱草热水提取物和水洗脱前部位的Fehling反应、Molish反应、泡沫试验、三氯化铁试验、溴甲酚绿试验和盐酸一镁粉反应均为阳性;水洗脱后部位的Fehling反应、Molish反应、三氯化铁试验和盐酸一镁粉反应均为阳性,而溴甲酚绿试验和泡沫试验为阴性反应。结论：葛根、天花粉、金银花和广金钱草都具有一定的体外纤溶活性,以广金钱草的纤溶活性最强;广金钱草的纤溶活性成分很可能是还原糖、多糖、鞣质、有机酸、皂苷或黄酮苷。     

中国东部南北样带典型针叶林土壤酶活性分布格局

选取中国东部南北样带不同气候区(寒温带、温带和亚热带)的针叶林作为研究对象,分析了多酚氧化酶、过氧化物酶、几丁质酶以及β-葡萄糖苷酶活性的变化。结果表明,土壤溶解性有机碳(DOC)、微生物生物量碳(MBC)、微生物生物量氮(MBN)含量从北到南依次减小,寒温带显著高于亚热带;土壤p H值在3个气候区差异显著,温带最高,亚热带最低。分解木质素的多酚氧化酶和过氧化物酶活性不存在显著性差异;而与氮循环密切相关的几丁质酶活性表现为温带显著高于寒温带和亚热带;与碳循环密切的β-葡萄糖苷酶活性在温带最高,并显著高于亚热带地区。逐步回归分析表明,土壤MBN与p H值影响土壤几丁质酶活性,而土壤β-葡萄糖苷酶活性主要受p H的控制。研究认为,在中国东部南北样带针叶林中,土壤几丁质酶和β-葡萄糖苷酶活性存在显著性差异,而p H与MBN可能是影响土壤酶活性的主要因素。     

矿区不同复垦措施对土壤碳矿化和酶活性的影响

矿区废弃地生态退化形势严峻,生态修复已成为矿区可持续发展的主要措施,目前关于矿区复垦后土壤碳矿化和酶活性变化的研究较少。以山西省孝义市露天矿区复垦区为研究对象,植被恢复类型包括了百脉根、苜蓿、油松和柳树-圆柏混交林,并对其分别进行不施肥(对照)、无机肥、复合肥和有机肥处理,从而研究植被类型与施肥方式对矿区土壤碳矿化和酶活性的影响。结果表明,乔本比草本恢复类型的土壤有机碳矿化潜势大,不同施肥条件的土壤有机碳矿化潜势和累积量趋势基本为:对照无机肥复合肥有机肥;4种土壤酶活性因植被恢复类型和施肥处理的不同而差异显著,不同土壤酶与降解特性不同的有机碳间相关性有所不同。土壤碳矿化累积量和酶活性均受植被恢复类型、施肥处理及两者交互作用的显著影响,因此对复垦措施敏感的土壤有机碳矿化和酶活性可作为评价复垦措施的指标。     

低温胁迫下枇杷幼果种子膜脂过氧化、保护酶活性及显微结构的变化

枇杷(Eriobotrya japonica)开花结果正值冬季低温期,易受低温影响,因此寒害成为抑制枇杷健康生长、发育的重要因素之一。种子作为产生多种内源激素的中心,其健康程度与枇杷果实正常发育息息相关。该研究以四川省成都市龙泉驿区柏合镇的‘早钟六号’枇杷幼果种子为材料,经不同低温(6、3、0、-3℃)胁迫不同时间(12、24、36、48 h)后,对其相对电导率、丙二醛(MDA)、超氧化物歧化酶(SOD)、过氧化氢酶(CAT)和过氧化物酶(POD)的变化进行测定以及细胞解剖结构分析,旨在探究枇杷幼果种子抗寒机制,为提高四川地区枇杷抗寒栽培新技术提供理论和实践依据。结果表明:低温胁迫下,枇杷幼果种子相对电导率及MDA含量随着处理温度的降低整体呈上升趋势;保护酶SOD、CAT活性在低温胁迫前期不同程度升高,至某个低温后呈下降趋势;而POD活性总体呈升-降-升趋势;相对电导率、MDA含量、SOD活性、CAT活性、POD活性的变化临界温度均为6℃,胁迫临界时间分别为12、24、48、36 h,而MDA含量变化临界温度为3℃,胁迫临界时间为36 h;显微结构表明枇杷幼果种子6℃低温开始受冻,最先受冻部位为种皮,其次为种胚真叶原始体或真叶,最后到细胞破裂,说明枇杷幼果种子随着处理温度降低,细胞结构受损越严重。综上,枇杷幼果种子受冻临界温度为6℃,受冻临界时间为12 h。     

重组人神经生长因子rh-β-NGF真核表达载体的构建及其在HEK293细胞中的表达

为大量制备β-NGF,构建了一种稳定、高效表达重组人神经生长因子(Recombinant human nerve growth factor,rh-β-NGF)的真核表达载体及含该重组载体的HEK293细胞株。首先,构建重组质粒p CMV-β-NGF-IRES-dhfr并转染至HEK293细胞系,用MTX加压筛选和有限稀释法进行选择,获得高效表达rh-β-NGF的单克隆重组细胞株;随后逐步降低血清培养,最终使细胞株完全适应无血清培养基并稳定表达rh-β-NGF;SDS-PAGE分析该表达产物,可见相对分子质量约13 k Da的条带,纯度大于50%,经质谱法测定得到其肽图谱与理论序列完全匹配,接着利用离子交换层析和分子筛层析纯化rh-β-NGF;最后进行重组细胞株表达效率和表达稳定性检测,表明重组细胞株可稳定、高效表达rh-β-NGF,其分泌效率大于20 pg/(cell?d),并能诱导PC12细胞的分化,具有良好的生物学活性。     

Exotic grasses and nitrate enrichment alter soil carbon cycling along an urban–rural tropical forest gradient

Urban areas are expanding rapidly in tropical regions, with potential to alter ecosystem dynamics. In particular, exotic grasses and atmospheric nitrogen (N) deposition simultaneously affect tropical urbanized landscapes, with unknown effects on properties like soil carbon (C) storage. We hypothesized that (H1) soil nitrate (NO₃^?) is elevated nearer to the urban core, reflecting N deposition gradients. (H2) Exotic grasslands have elevated soil NO₃^? and decreased soil C relative to secondary forests, with higher N promoting decomposer activity. (H3) Exotic grasslands have greater seasonality in soil NO₃^? vs. secondary forests, due to higher sensitivity of grassland soil moisture to rainfall. We predicted that NO₃^? would be positively related to dissolved organic C (DOC) production via changes in decomposer activity. We measured six paired grassland/secondary forest sites along a tropical urban‐to‐rural gradient during the three dominant seasons (hurricane, dry, and early wet). We found that (1) soil NO₃^? was generally elevated nearer to the urban core, with particularly clear spatial trends for grasslands. (2) Exotic grasslands had lower soil C than secondary forests, which was related to elevated decomposer enzyme activities and soil respiration. Unexpectedly, soil NO₃^? was negatively related to enzyme activities, and was lower in grasslands than forests. (3) Grasslands had greater soil NO₃^? seasonality vs. forests, but this was not strongly linked to shifts in soil moisture or DOC. Our results suggest that exotic grasses in tropical regions are likely to drastically reduce soil C storage, but that N deposition may have an opposite effect via suppression of enzyme activities. However, soil NO₃^? accumulation here was higher in urban forests than grasslands, potentially related to of aboveground N interception. Net urban effects on C storage across tropical landscapes will likely vary depending on the mosaic of grass cover, rates of N deposition, and responses by local decomposer communities.     

Conformational and biological properties of Bauhinia bauhinioides kallikrein inhibitor fragments with bradykinin‐like activities

Proteinase inhibitors extracted form medicinal plants are an interesting source of new drugs. Modifications in the structure of some of this kind of macromolecules could also lead to compounds of interesting biological properties. In this work, we synthesized and tested one fragment containing the reactive site of the Bauhinia bauhinioides kallikrein inhibitor (BbKI), denoted BbKI_51–62, and a related analog (P₂) in which a proline residue was inserted in order to mimic the N‐terminal region of the bradykinin molecule. The related retro‐inverso counterparts Ri‐BbKI_51–62 and Ri‐P₂ were also included. The ability of these peptides to induce contraction of stomach fundus isolated from mouse was evaluated as well as their capability to induce calcium release from a cell culture of smooth muscle from guinea pig ileum. The conformational properties of the peptides were evaluated by circular dichroism and their resistance to enzymatic degradation by exposure to human blood plasma. Our results show that neither the parent BbKI_51–62 nor its Ri‐BbKI_51–62 analog exhibit bradykinin‐like activity, although the retro‐inverso isomer was resistant to blood plasma degradation. On the other hand, the peptides P₂ and Ri‐P₂ presented contractile activities on gastric smooth muscle from stomach fundus possibly by acting via B‐2 receptor. Both compounds also induce calcium release from guinea pig ileum muscle cells in a manner similar to bradykinin. Moreover, both compounds also inhibited porcine pancreatic kallikrein. However, conformational analysis did not reveal any direct correlation between structure and biological effects. Copyright © 2015 European Peptide Society and John Wiley & Sons, Ltd.     

Reflexions on some aspects of the interactions among ROS,RNS, and Ca2+ in response to a mycorrhizal or a pathogenic fungus

In vivo redox activities in the apoplast of axenically cultured intact seedling roots (superoxide anion generation, and superoxide dismutase and peroxidase activities) in contact with the compatible arbuscular mycorrhizal fungus (AMF) were clearly attenuated in comparison with those in contact with the pathogenic fungus (PF) or treated with MeJA, even at the early stages of treatment. Contact of roots with the AMF did not enhance the biosynthesis of phenolic compounds (total phenolics, flavonoids, and phenylpropanoid glycosides), while contact with the PF significantly enhanced the biosynthesis of all phenolic fractions. Reactive oxygen and nitrogen species both seemed to be involved in these responses from the first moments of contact, but the fluorescence imaging of roots showed that ROS were mainly accumulated in the apoplast while NO was mainly stored in the cytosol. In conclusion, intact olive seedling roots clearly differentiated between AMF and PF.